Go to the Theory and Concepts page
This page contains the laboratory materials for the BACI2025 course, specifically covering the sections I oversee. The laboratory sessions build upon concepts from the hydrology class while extending into more advanced simulations, including applications of the GEOSPACE system. GEOSPACE is based upon GEOframe is an open-source, component-based hydrological modeling framework developed primarily by researchers in Italy. It's designed to be modular and flexible, allowing researchers to combine different hydrological processes and models.
- Conda (Vimeo2025)
- Java: To Install Java go to the Adoptium website select your platform, archiecture and version 11). Dowloand and launch the installer
- OMS material
OMS3 (Object Modeling System 3) is a Java-based environmental modeling framework developed by the U.S. Geological Survey (USGS) and Colorado State University. It's designed to facilitate the development, integration, and deployment of environmental and agricultural models.
- OMS3 (Slides) (Video2025, Video)
- Working Environment (Slides) (Video2025, Video)
- Simulation files (Slides) (Vimeo2025,Video: 1, 2)
- For running an OMS project, see this other post.
- Exploring a WHETGEO project. Everything is explained in the WHETGEO1D_RichardsCoupled_Computational_grid notebook (Vimeo2025)
- Please also browse directly the files:
- The grid file: ex00_grid.csv , Initial Conditions: ex00_ic.csv, Parameters: (for van Genuchten): Richards_VG.csv, Dictionary: dictionary.csv (Vimeo2025)
- WHETGEO1D.sim (Vimeo2025)
- Analysis of WHETGEO1D.sim (Vimeo2025)
- To run WHETGEO use the Runner_WHETGEO.ipynb notebook (Vimeo 2025)
- Please observe that the oms.py file needs to be in the same folder than the Notebook
- During the course a more solid solution was provided here.
- How to visualize and interpret the data through the Visualize_output.ipynb Notebook (Vimeo 2025)
- Utilities:
- To proper formatting (according to OMS3) rainfall files, peruse the TimeSeriesFormatter.ipynb Notebook (Vimeo2025)
- How to create an empty TimeSeries using TimeSeriesCreator.ipynb (Vimeo2025)
- Please see the 05_NET.sim file in the project's simulation folder (Vimeo2025)
- Inputs are in Input_Radiation.ipynb (Vimeo2025)
- Outputs are in the Output_Radiation.ipynb (Vimeo2025)
- The simulation runner is Runner_NetRadiation.ipynb (Vimeo2025)
- Exploring a GEOET project
- Exploring a GEOSPACE project
- Bottazzi, M. 2020. “Transpiration Theory and the Prospero Component of GEOframe.” Edited by R. Rigon and G. Bertoldi. Ph.D., DICAM.
- D’Amato, Concetta. n.d. “Exploring the Soil-Plant-Atmosphere Continuum: Advancements, Integrated Modeling and Ecohydrological Insights.” Ph.D., Università di Trento.
- D’Amato, Concetta, Niccolò Tubini, and Riccardo Rigon. 2025. “A Component Based Modular Treatment of the Soil-Plant-Atmosphere Continuum: The GEOSPACE Framework (v.1.2.9).” https://doi.org/10.5194/egusphere-2024-4128.
- Tubini, N. 2021, June. “Theoretical and Numerical Tools for Studying the Critical Zone from Plots to Catchments.” Edited by R. Rigon and S. Gruber. Ph.D., Dipartimento di Ingegneria Civile, Ambientale e Meccanica, Università di Trento.
- Tubini, Niccolò, and Riccardo Rigon. 2022. “Implementing the Water, HEat and Transport Model in GEOframe (WHETGEO-1D v.1.0): Algorithms, Informatics, Design Patterns, Open Science Features, and 1D Deployment.” Geoscientific Model Development 15 (1): 75–104. https://doi.org/10.5194/gmd-15-75-2022.
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